RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g49150.1 View Network Show in Genome Browser |
| Other Names | Os01g0685200 |
| Description | anti-silencing protein, ASF1-like domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28242146-28246259 Nucleotide Length: 915 |
| Protein-coding | LOC_Os01g49150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43410 LOC_Os01g08970 LOC_Os01g46020 LOC_Os01g23630 |
| Downstream Genes | LOC_Os01g49154 LOC_Os03g57450 LOC_Os12g30150 LOC_Os03g57510 LOC_Os07g06740 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g49150.1 |
| Rice Genome Annotation | LOC_Os01g49150.1 |
| Ricechip | LOC_Os01g49150.1 |
| KEGG | osa:4324146 dosa:Os01t0685200-01 |
| Entrez-Gene | 4324146 |