RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g49200.1 View Network Show in Genome Browser |
| Other Names | Os01g0685900 |
| Description | microtubule associated protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28282813-28287096 Nucleotide Length: 2070 |
| Protein-coding | LOC_Os01g49200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0007610 | behavior | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08150 LOC_Os01g47600 LOC_Os01g37837 LOC_Os01g15260 LOC_Os01g16650 LOC_Os01g15480 |
| Downstream Genes | LOC_Os12g02710 LOC_Os11g02740 LOC_Os01g55220 LOC_Os08g40170 LOC_Os04g47580 LOC_Os07g01490 LOC_Os05g43140 LOC_Os03g56070 LOC_Os02g56540 LOC_Os10g35580 LOC_Os03g24180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g49200.1 |
| Rice Genome Annotation | LOC_Os01g49200.1 |
| Ricechip | LOC_Os01g49200.1 |
| KEGG | osa:4324106 dosa:Os01t0685900-01 |
| Entrez-Gene | 4324106 |