RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g49270.1 View Network Show in Genome Browser |
| Other Names | Os01g0686600 |
| Description | XPA-binding protein 2, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28322661-28324988 Nucleotide Length: 2136 |
| Protein-coding | LOC_Os01g49270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40610 LOC_Os01g40600 |
| Downstream Genes | LOC_Os05g22260 LOC_Os04g28090 LOC_Os02g39050 LOC_Os02g52250 LOC_Os05g07050 LOC_Os03g21990 LOC_Os06g33250 LOC_Os03g27970 LOC_Os02g01740 LOC_Os12g15420 LOC_Os12g42140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g49270.1 |
| Rice Genome Annotation | LOC_Os01g49270.1 |
| Ricechip | LOC_Os01g49270.1 |
| KEGG | osa:4324113 dosa:Os01t0686600-01 |
| Entrez-Gene | 4324113 |