RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g49290.1 View Network Show in Genome Browser |
| Other Names | Os01g0686800 |
| Description | WD repeat-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28330800-28333392 Nucleotide Length: 1005 |
| Protein-coding | LOC_Os01g49290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25610 LOC_Os01g24690 LOC_Os01g04730 LOC_Os01g47660 LOC_Os01g10820 LOC_Os01g22490 LOC_Os01g49190 LOC_Os01g16890 LOC_Os01g19840 LOC_Os01g46380 LOC_Os01g46070 More.. |
| Downstream Genes | LOC_Os03g08440 LOC_Os03g58204 LOC_Os06g02510 LOC_Os03g37970 LOC_Os05g27940 LOC_Os03g18570 LOC_Os03g18580 LOC_Os03g22180 LOC_Os11g04070 LOC_Os12g03880 LOC_Os01g67134 More.. |
| Reference | |
|---|---|
| PubMed | 18723578 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g49290.1 |
| Rice Genome Annotation | LOC_Os01g49290.1 |
| Ricechip | LOC_Os01g49290.1 |
| KEGG | osa:4324115 dosa:Os01t0686800-02 |
| Entrez-Gene | 4324115 |