RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g49680.1 View Network Show in Genome Browser |
| Other Names | Os01g0691600 |
| Description | DNA repair helicase XPB2, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28545584-28553827 Nucleotide Length: 2301 |
| Protein-coding | LOC_Os01g49680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08970 LOC_Os01g04870 LOC_Os01g32750 LOC_Os01g48810 LOC_Os01g34614 LOC_Os01g23630 LOC_Os01g46020 LOC_Os01g27040 LOC_Os01g40980 LOC_Os01g09000 LOC_Os01g46380 More.. |
| Downstream Genes | LOC_Os04g42990 LOC_Os05g05260 LOC_Os08g25060 LOC_Os02g03340 LOC_Os04g58350 LOC_Os06g19980 LOC_Os03g10780 LOC_Os03g52750 LOC_Os07g44970 LOC_Os11g28350 LOC_Os10g25770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g49680.1 |
| Rice Genome Annotation | LOC_Os01g49680.1 |
| Ricechip | LOC_Os01g49680.1 |
| KEGG | osa:4325640 dosa:Os01t0691600-01 |
| Entrez-Gene | 4325640 |