RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g49690.1 View Network Show in Genome Browser |
| Other Names | Os01g0691700 |
| Description | Ser/Thr protein phosphatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28555935-28560699 Nucleotide Length: 912 |
| Protein-coding | LOC_Os01g49690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40340 LOC_Os01g13190 LOC_Os01g38950 LOC_Os01g27630 LOC_Os01g14040 LOC_Os01g15490 LOC_Os01g40370 LOC_Os01g13760 LOC_Os01g27390 LOC_Os01g43030 LOC_Os01g27360 More.. |
| Downstream Genes | LOC_Os05g51490 LOC_Os12g04290 LOC_Os11g04520 LOC_Os04g52940 LOC_Os10g27050 LOC_Os06g11640 LOC_Os03g07150 LOC_Os06g03940 LOC_Os03g59060 LOC_Os11g15570 LOC_Os04g33470 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g49690.1 |
| Rice Genome Annotation | LOC_Os01g49690.1 |
| Ricechip | LOC_Os01g49690.1 |
| KEGG | osa:4325641 dosa:Os01t0691700-01 |
| Entrez-Gene | 4325641 |