RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g50010.1 View Network Show in Genome Browser |
| Other Names | Os01g0694900 |
| Description | clathrin assembly protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28728977-28735072 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os01g50010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47780 LOC_Os01g12900 LOC_Os01g45990 LOC_Os01g11250 LOC_Os01g48330 LOC_Os01g48680 LOC_Os01g11010 LOC_Os01g09570 LOC_Os01g48170 |
| Downstream Genes | LOC_Os01g62370 LOC_Os02g56270 LOC_Os06g23440 LOC_Os05g04820 LOC_Os07g47630 LOC_Os04g45010 LOC_Os03g15940 LOC_Os03g14170 LOC_Os03g45920 LOC_Os04g52140 LOC_Os02g42820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g50010.1 |
| Rice Genome Annotation | LOC_Os01g50010.1 |
| Ricechip | LOC_Os01g50010.1 |
| KEGG | dosa:Os01t0694900-01 |
| Entrez-Gene | 4323889 |