RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51010.1 View Network Show in Genome Browser |
| Other Names | Os01g0706400 |
| Description | DUF292 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29306448-29312618 Nucleotide Length: 3306 |
| Protein-coding | LOC_Os01g51010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43410 LOC_Os01g47256 LOC_Os01g04840 LOC_Os01g32080 LOC_Os01g47760 LOC_Os01g19470 LOC_Os01g16190 LOC_Os01g36930 |
| Downstream Genes | LOC_Os07g06740 LOC_Os03g57450 LOC_Os03g57510 LOC_Os12g30150 LOC_Os04g49510 LOC_Os02g46090 LOC_Os02g58520 LOC_Os11g07040 LOC_Os12g07230 LOC_Os03g03660 LOC_Os05g50810 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5535 osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51010.1 |
| Rice Genome Annotation | LOC_Os01g51010.1 |
| Ricechip | LOC_Os01g51010.1 |
| KEGG | osa:4327673 dosa:Os01t0706400-01 |
| Entrez-Gene | 4327673 |