RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51154.1 View Network Show in Genome Browser |
| Other Names | Os01g0708000 |
| Description | single myb histone, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29405623-29411374 Nucleotide Length: 921 |
| Protein-coding | LOC_Os01g51154 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g14420 LOC_Os01g47490 |
| Downstream Genes | LOC_Os08g04280 LOC_Os04g40420 LOC_Os03g58470 LOC_Os05g51850 LOC_Os09g04810 LOC_Os06g29310 LOC_Os01g72890 LOC_Os04g25550 LOC_Os03g52490 LOC_Os02g38580 LOC_Os02g38574 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51154.1 |
| Rice Genome Annotation | LOC_Os01g51154.1 |
| Ricechip | LOC_Os01g51154.1 |
| KEGG | osa:4327680 dosa:Os01t0708000-00 |
| Entrez-Gene | 4327680 |