RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51200.1 View Network Show in Genome Browser |
| Other Names | Os01g0708400 |
| Description | CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29431601-29436466 Nucleotide Length: 1419 |
| Protein-coding | LOC_Os01g51200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08760 LOC_Os01g40340 LOC_Os01g08770 LOC_Os01g43410 LOC_Os01g19130 LOC_Os01g49690 LOC_Os01g40094 LOC_Os01g16930 LOC_Os01g13270 LOC_Os01g40470 LOC_Os01g40250 More.. |
| Downstream Genes | LOC_Os11g19250 LOC_Os02g05630 LOC_Os04g56450 LOC_Os06g48300 LOC_Os04g37904 LOC_Os06g33530 LOC_Os07g32380 LOC_Os06g33549 LOC_Os01g66520 LOC_Os02g55560 LOC_Os02g15594 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51200.1 |
| Rice Genome Annotation | LOC_Os01g51200.1 |
| Ricechip | LOC_Os01g51200.1 |
| KEGG | osa:9267711 |
| Entrez-Gene | 9267711 |