RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51320.1 View Network Show in Genome Browser |
| Other Names | Os01g0710200 |
| Description | peroxisomal N-acetyl-spermine/spermidine oxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29513284-29514918 Nucleotide Length: 1539 |
| Protein-coding | LOC_Os01g51320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18320 LOC_Os01g22520 LOC_Os01g27050 LOC_Os01g21380 LOC_Os01g51120 LOC_Os01g05694 LOC_Os01g28450 |
| Downstream Genes | LOC_Os07g10490 LOC_Os04g41260 LOC_Os07g43370 LOC_Os03g08570 LOC_Os12g16650 LOC_Os04g59630 LOC_Os12g43590 LOC_Os10g40570 LOC_Os01g72980 LOC_Os07g04240 LOC_Os05g06750 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn01100 rn01110 |
| Metacyc Pathways | CHLOROPHYLL-SYN HEMEBIOSYNTHESISII |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51320.1 |
| Rice Genome Annotation | LOC_Os01g51320.1 |
| Ricechip | LOC_Os01g51320.1 |
| KEGG | osa:4327828 dosa:Os01t0710200-00 |
| Entrez-Gene | 4327828 |