RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51410.1 View Network Show in Genome Browser |
| Other Names | Os01g0711400 |
| Description | glycine dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29560350-29567065 Nucleotide Length: 3102 |
| Protein-coding | LOC_Os01g51410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g21160 LOC_Os01g48990 |
| Downstream Genes | LOC_Os04g53230 LOC_Os10g37180 LOC_Os02g07410 LOC_Os06g45670 LOC_Os06g40940 LOC_Os01g52010 LOC_Os08g38720 LOC_Os05g44210 LOC_Os03g52840 LOC_Os01g51980 LOC_Os10g32550 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00260 rn01100 |
| Metacyc Pathways | GLYCLEAV-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51410.1 |
| Rice Genome Annotation | LOC_Os01g51410.1 |
| Ricechip | LOC_Os01g51410.1 |
| KEGG | osa:4325932 dosa:Os01t0711400-01 |
| Entrez-Gene | 4325932 |