RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51540.1 View Network Show in Genome Browser |
| Other Names | Os01g0712700 |
| Description | cytidine/deoxycytidylate deaminase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29605119-29606563 Nucleotide Length: 939 |
| Protein-coding | LOC_Os01g51540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g04210 LOC_Os01g55974 LOC_Os06g29430 LOC_Os03g20570 LOC_Os03g02600 LOC_Os02g27340 LOC_Os07g14150 LOC_Os06g48230 LOC_Os03g61810 LOC_Os07g46630 LOC_Os03g62870 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 rn00983 |
| Metacyc Pathways | P1-PWY DRIBOPMET-PWY PWY0-163 PWY0-181 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51540.1 |
| Rice Genome Annotation | LOC_Os01g51540.1 |
| Ricechip | LOC_Os01g51540.1 |
| KEGG | osa:4325937 dosa:Os01t0712700-01 |
| Entrez-Gene | 4325937 |