RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51620.1 View Network Show in Genome Browser |
| Other Names | Os01g0713800 |
| Description | KRR1 small subunit processome component, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29645867-29649216 Nucleotide Length: 1266 |
| Protein-coding | LOC_Os01g51620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08770 LOC_Os01g37770 LOC_Os01g33050 LOC_Os01g07080 LOC_Os01g27730 LOC_Os01g34200 LOC_Os01g43020 LOC_Os01g40250 LOC_Os01g13730 LOC_Os01g25610 LOC_Os01g24690 More.. |
| Downstream Genes | LOC_Os11g01420 LOC_Os03g22880 LOC_Os12g01430 LOC_Os06g06410 LOC_Os01g59500 LOC_Os08g31810 LOC_Os03g49210 LOC_Os04g43140 LOC_Os03g58340 LOC_Os03g63690 LOC_Os02g37870 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51620.1 |
| Rice Genome Annotation | LOC_Os01g51620.1 |
| Ricechip | LOC_Os01g51620.1 |
| KEGG | osa:9272342 dosa:Os01t0713800-00 |
| Entrez-Gene | 9272342 |