RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51754.1 View Network Show in Genome Browser |
| Other Names | Os01g0715400 |
| Description | alpha-amylase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29760719-29763942 Nucleotide Length: 1686 |
| Protein-coding | LOC_Os01g51754 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g29404 LOC_Os08g40930 LOC_Os06g26234 LOC_Os06g30310 LOC_Os07g44180 LOC_Os10g10500 LOC_Os09g38560 LOC_Os06g08564 LOC_Os05g29920 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-842 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51754.1 |
| Rice Genome Annotation | LOC_Os01g51754.1 |
| Ricechip | LOC_Os01g51754.1 |
| KEGG | osa:4325575 dosa:Os01t0715400-03 |
| Entrez-Gene | 4325575 |