RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51770.1 View Network Show in Genome Browser |
| Other Names | Os01g0715500 |
| Description | outer mitochondrial membrane porin, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29770182-29773361 Nucleotide Length: 954 |
| Protein-coding | LOC_Os01g51770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16910 LOC_Os01g40570 LOC_Os01g09460 LOC_Os01g04260 LOC_Os01g51380 LOC_Os01g44130 |
| Downstream Genes | LOC_Os09g19734 LOC_Os03g20750 LOC_Os06g06090 LOC_Os03g17700 LOC_Os05g45950 LOC_Os03g02260 LOC_Os04g56710 LOC_Os10g32550 LOC_Os02g53420 LOC_Os05g34770 LOC_Os03g04460 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51770.1 |
| Rice Genome Annotation | LOC_Os01g51770.1 |
| Ricechip | LOC_Os01g51770.1 |
| KEGG | osa:4325576 dosa:Os01t0715500-00 |
| Entrez-Gene | 4325576 |