RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g51980.1 View Network Show in Genome Browser |
| Other Names | Os01g0717400 |
| Description | alliin lyase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29874486-29877505 Nucleotide Length: 1458 |
| Protein-coding | LOC_Os01g51980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51410 |
| Downstream Genes | LOC_Os03g53300 LOC_Os02g19150 LOC_Os10g25030 LOC_Os08g38700 LOC_Os01g66150 LOC_Os03g61760 LOC_Os09g04440 LOC_Os07g07480 LOC_Os02g53860 LOC_Os10g21910 LOC_Os04g45200 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00340 rn01100 rn01110 |
| Metacyc Pathways | HISTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g51980.1 |
| Rice Genome Annotation | LOC_Os01g51980.1 |
| Ricechip | LOC_Os01g51980.1 |
| KEGG | osa:4325587 dosa:Os01t0717400-01 |
| Entrez-Gene | 4325587 |