RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g52050.1 View Network Show in Genome Browser |
| Other Names | Os01g0718300 |
| Description | systemin receptor SR160 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 29927543-29931487 Nucleotide Length: 3366 |
| Protein-coding | LOC_Os01g52050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19130 LOC_Os01g43100 LOC_Os01g49330 LOC_Os01g40094 |
| Downstream Genes | LOC_Os06g48300 LOC_Os02g05630 LOC_Os06g33549 LOC_Os02g15594 LOC_Os02g55560 LOC_Os04g37904 LOC_Os04g56450 LOC_Os09g28550 LOC_Os08g36970 LOC_Os08g21660 LOC_Os08g07760 More.. |
| Reference | |
|---|---|
| PubMed | 11006334 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g52050.1 |
| Rice Genome Annotation | LOC_Os01g52050.1 |
| Ricechip | LOC_Os01g52050.1 |
| KEGG | osa:4324691 dosa:Os01t0718300-01 |
| Entrez-Gene | 4324691 |