RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os01g52470.1 View Network Show in Genome Browser |
Other Names | Os01g0723000 |
Description | elongation factor, putative, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30143575-30146827 Nucleotide Length: 2562 |
Protein-coding | LOC_Os01g52470 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g19840 LOC_Os01g16890 LOC_Os01g25610 LOC_Os01g10820 LOC_Os01g51380 LOC_Os01g22490 LOC_Os01g18860 LOC_Os01g38970 LOC_Os01g08560 LOC_Os01g51020 LOC_Os01g48770 More.. |
Downstream Genes | LOC_Os07g08660 LOC_Os03g58430 LOC_Os08g13690 LOC_Os04g51630 LOC_Os02g12800 LOC_Os02g12794 LOC_Os04g02820 LOC_Os03g37970 LOC_Os09g30412 LOC_Os09g30418 LOC_Os02g32030 More.. |
Pathways | |
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KEGG Pathways | rn00230 |
Database Links | |
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Gramene | LOC_Os01g52470.1 |
Rice Genome Annotation | LOC_Os01g52470.1 |
Ricechip | LOC_Os01g52470.1 |
KEGG | osa:4324669 dosa:Os01t0723000-01 |
Entrez-Gene | 4324669 |