RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os01g52490.1 View Network Show in Genome Browser |
Other Names | Os01g0723200 |
Description | 40S ribosomal protein S24, putative, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30157882-30159775 Nucleotide Length: 417 |
Protein-coding | LOC_Os01g52490 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g10820 LOC_Os01g25610 LOC_Os01g22490 LOC_Os01g04730 LOC_Os01g16890 LOC_Os01g47660 LOC_Os01g51020 LOC_Os01g03070 LOC_Os01g24690 LOC_Os01g19840 LOC_Os01g48770 More.. |
Downstream Genes | LOC_Os01g55974 LOC_Os02g06700 LOC_Os02g33140 LOC_Os08g02410 LOC_Os05g48310 LOC_Os08g02400 LOC_Os02g27760 LOC_Os03g18570 LOC_Os07g10720 LOC_Os03g18580 LOC_Os04g51630 More.. |
miRNA Regulations | |
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miRNAs | osa-miR1858a osa-miR1858b |
Database Links | |
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Gramene | LOC_Os01g52490.1 |
Rice Genome Annotation | LOC_Os01g52490.1 |
Ricechip | LOC_Os01g52490.1 |
KEGG | osa:4324671 dosa:Os01t0723200-01 |
Entrez-Gene | 4324671 |