RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g52500.4 View Network Show in Genome Browser
Other Names	Os01g0723400
Description	NADP-dependent malic enzyme, putative, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 30166024-30171659 Nucleotide Length: 1491
Protein-coding	LOC_Os01g52500

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g18050 LOC_Os01g38970 LOC_Os01g51380 LOC_Os01g49190 LOC_Os01g49290 LOC_Os01g18860 LOC_Os01g16960 LOC_Os01g22010 LOC_Os01g47660 LOC_Os01g52470 LOC_Os01g40470 More..
Downstream Genes	LOC_Os01g65730 LOC_Os12g03720 LOC_Os11g14220 LOC_Os03g51600 LOC_Os03g51140 LOC_Os03g45920 LOC_Os02g58020 LOC_Os06g03780 LOC_Os11g03900 LOC_Os02g48620 LOC_Os10g35280 More..

Pathways
KEGG Pathways	rn00620 rn00710 rn01100 rn01120
Metacyc Pathways	GLUCONEO-PWY PWY-241

Reference
PubMed	17245561

Database Links
Gramene	LOC_Os01g52500.4
Rice Genome Annotation	LOC_Os01g52500.4
Ricechip	LOC_Os01g52500.4
KEGG	osa:4324717 dosa:Os01t0723400-01
Entrez-Gene	4324717