RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g52790.1 View Network Show in Genome Browser |
| Other Names | Os01g0728300 |
| Description | cytochrome P450 72A1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30372204-30376917 Nucleotide Length: 1560 |
| Protein-coding | LOC_Os01g52790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11300 LOC_Os01g11340 LOC_Os01g11270 LOC_Os01g11280 LOC_Os01g49120 LOC_Os01g31980 LOC_Os01g24810 |
| Downstream Genes | LOC_Os08g12760 LOC_Os04g51940 LOC_Os06g29844 LOC_Os03g20570 LOC_Os03g61790 LOC_Os05g51550 LOC_Os06g29994 LOC_Os01g57360 LOC_Os04g30490 LOC_Os10g11354 LOC_Os09g10850 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6248 osa-miR812f |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g52790.1 |
| Rice Genome Annotation | LOC_Os01g52790.1 |
| Ricechip | LOC_Os01g52790.1 |
| KEGG | dosa:Os01t0728300-01 |
| Entrez-Gene | 4323921 |