RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g52900.1 View Network Show in Genome Browser |
| Other Names | Os01g0729600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30413604-30415814 Nucleotide Length: 1851 |
| Protein-coding | LOC_Os01g52900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47340 |
| Downstream Genes | LOC_Os03g21490 LOC_Os01g61400 LOC_Os05g31080 LOC_Os12g30030 LOC_Os05g49300 LOC_Os10g08010 LOC_Os04g50864 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g52900.1 |
| Rice Genome Annotation | LOC_Os01g52900.1 |
| Ricechip | LOC_Os01g52900.1 |
| KEGG | dosa:Os01t0729600-01 |
| Entrez-Gene | 4323929 |