RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g53520.1 View Network Show in Genome Browser |
| Other Names | Os01g0736900 |
| Description | reticulon domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30738697-30740729 Nucleotide Length: 762 |
| Protein-coding | LOC_Os01g53520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12650 LOC_Os01g04640 |
| Downstream Genes | LOC_Os05g49890 LOC_Os02g06340 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g53520.1 |
| Rice Genome Annotation | LOC_Os01g53520.1 |
| Ricechip | LOC_Os01g53520.1 |
| KEGG | osa:4327874 dosa:Os01t0736900-01 |
| Entrez-Gene | 4327874 |