RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g53700.1 View Network Show in Genome Browser |
| Other Names | Os01g0739000 |
| Description | mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30850589-30856227 Nucleotide Length: 1500 |
| Protein-coding | LOC_Os01g53700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51390 LOC_Os01g34390 LOC_Os01g52470 LOC_Os01g44130 LOC_Os01g39020 |
| Downstream Genes | LOC_Os01g57073 LOC_Os07g38270 LOC_Os07g38260 LOC_Os12g04010 LOC_Os07g38280 LOC_Os11g04200 LOC_Os03g11410 LOC_Os02g52390 LOC_Os03g21810 LOC_Os06g41990 LOC_Os01g57082 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g53700.1 |
| Rice Genome Annotation | LOC_Os01g53700.1 |
| Ricechip | LOC_Os01g53700.1 |
| KEGG | osa:4327198 dosa:Os01t0739000-01 |
| Entrez-Gene | 4327198 |