RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g53720.1 View Network Show in Genome Browser |
| Other Names | Os01g0739400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30879000-30886338 Nucleotide Length: 1629 |
| Protein-coding | LOC_Os01g53720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g22490 LOC_Os01g51020 |
| Downstream Genes | LOC_Os03g20949 LOC_Os11g03670 LOC_Os12g03430 LOC_Os12g38000 LOC_Os11g11390 LOC_Os02g19770 LOC_Os05g06770 LOC_Os08g03640 LOC_Os07g38970 LOC_Os07g05580 LOC_Os11g04070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g53720.1 |
| Rice Genome Annotation | LOC_Os01g53720.1 |
| Ricechip | LOC_Os01g53720.1 |
| KEGG | osa:4327201 dosa:Os01t0739400-01 |
| Entrez-Gene | 4327201 |