RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g53800.1 View Network Show in Genome Browser |
| Other Names | Os01g0740500 |
| Description | glutamate carboxypeptidase 2, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 30922769-30927426 Nucleotide Length: 1692 |
| Protein-coding | LOC_Os01g53800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53500 LOC_Os01g11500 |
| Downstream Genes | LOC_Os07g19530 LOC_Os07g06560 LOC_Os03g07130 LOC_Os11g24540 LOC_Os08g01360 LOC_Os03g57410 LOC_Os06g51430 LOC_Os07g06540 LOC_Os02g57710 LOC_Os01g68620 LOC_Os12g04130 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b osa-miR2104 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g53800.1 |
| Rice Genome Annotation | LOC_Os01g53800.1 |
| Ricechip | LOC_Os01g53800.1 |
| KEGG | osa:4327207 dosa:Os01t0740500-00 |
| Entrez-Gene | 4327207 |