RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54030.1 View Network Show in Genome Browser |
| Other Names | Os01g0743500 |
| Description | NADP-dependent malic enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31076571-31081377 Nucleotide Length: 1758 |
| Protein-coding | LOC_Os01g54030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18050 LOC_Os01g38970 LOC_Os01g51380 LOC_Os01g49190 LOC_Os01g53900 LOC_Os01g49290 LOC_Os01g18860 LOC_Os01g34200 LOC_Os01g16960 LOC_Os01g22010 LOC_Os01g47660 More.. |
| Downstream Genes | LOC_Os01g65730 LOC_Os06g03780 LOC_Os10g35280 LOC_Os03g44780 LOC_Os02g55260 LOC_Os12g03720 LOC_Os11g14220 LOC_Os03g51600 LOC_Os03g51140 LOC_Os03g45920 LOC_Os02g58020 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00620 rn00710 rn01100 rn01120 |
| Metacyc Pathways | GLUCONEO-PWY PWY-241 ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54030.1 |
| Rice Genome Annotation | LOC_Os01g54030.1 |
| Ricechip | LOC_Os01g54030.1 |
| KEGG | osa:4326552 dosa:Os01t0743500-01 |
| Entrez-Gene | 4326552 |