RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54100.1 View Network Show in Genome Browser |
| Other Names | Os01g0744300 |
| Description | CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31111291-31116151 Nucleotide Length: 2016 |
| Protein-coding | LOC_Os01g54100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g36860 LOC_Os01g01390 LOC_Os01g49330 LOC_Os01g25440 LOC_Os01g19130 |
| Downstream Genes | LOC_Os03g05690 LOC_Os03g16369 LOC_Os05g38810 LOC_Os08g25799 LOC_Os07g32380 LOC_Os06g33549 LOC_Os09g07360 LOC_Os04g56450 LOC_Os04g34720 LOC_Os04g37904 LOC_Os02g05630 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166i-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54100.1 |
| Rice Genome Annotation | LOC_Os01g54100.1 |
| Ricechip | LOC_Os01g54100.1 |
| KEGG | osa:4326170 dosa:Os01t0744300-01 |
| Entrez-Gene | 4326170 |