RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54240.2 View Network Show in Genome Browser |
| Other Names | Os01g0746200 |
| Description | nucleoporin, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31205561-31211275 Nucleotide Length: 1809 |
| Protein-coding | LOC_Os01g54240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10350 LOC_Os01g44394 LOC_Os01g19490 LOC_Os01g49000 LOC_Os01g45190 LOC_Os01g36890 LOC_Os01g12470 LOC_Os01g27040 LOC_Os01g36920 |
| Downstream Genes | LOC_Os03g22690 LOC_Os11g42420 LOC_Os06g44030 LOC_Os03g18180 LOC_Os05g51790 LOC_Os08g07960 LOC_Os02g10790 LOC_Os03g46480 LOC_Os06g20090 LOC_Os12g38110 LOC_Os08g01054 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54240.2 |
| Rice Genome Annotation | LOC_Os01g54240.2 |
| Ricechip | LOC_Os01g54240.2 |
| KEGG | osa:4326176 dosa:Os01t0746200-01 |
| Entrez-Gene | 4326176 |