RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54340.1 View Network Show in Genome Browser |
| Other Names | Os01g0747300 |
| Description | plant-specific domain TIGR01615 family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31272337-31274479 Nucleotide Length: 810 |
| Protein-coding | LOC_Os01g54340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08670 LOC_Os01g05840 |
| Downstream Genes | LOC_Os06g39370 LOC_Os02g34884 LOC_Os02g11790 LOC_Os02g44360 LOC_Os02g44370 LOC_Os11g20384 LOC_Os04g33310 LOC_Os07g30150 LOC_Os01g63690 LOC_Os04g46860 LOC_Os06g12260 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54340.1 |
| Rice Genome Annotation | LOC_Os01g54340.1 |
| Ricechip | LOC_Os01g54340.1 |
| KEGG | osa:4325540 dosa:Os01t0747300-01 |
| Entrez-Gene | 4325540 |