RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54370.1 View Network Show in Genome Browser |
| Other Names | Os01g0747500 |
| Description | dihydropyrimidinase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31283686-31287268 Nucleotide Length: 1221 |
| Protein-coding | LOC_Os01g54370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g38970 LOC_Os01g51170 LOC_Os01g40570 |
| Downstream Genes | LOC_Os04g58390 LOC_Os02g50350 LOC_Os12g28270 LOC_Os01g54380 LOC_Os02g03260 LOC_Os01g59340 LOC_Os05g01440 LOC_Os01g66500 LOC_Os08g15030 LOC_Os05g25850 LOC_Os01g72240 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5152-5p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | PWY0-162 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54370.1 |
| Rice Genome Annotation | LOC_Os01g54370.1 |
| Ricechip | LOC_Os01g54370.1 |
| KEGG | osa:4325542 dosa:Os01t0747500-01 |
| Entrez-Gene | 4325542 |