RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54420.1 View Network Show in Genome Browser |
| Other Names | Os01g0748000 |
| Description | dynamin family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31308244-31312914 Nucleotide Length: 2469 |
| Protein-coding | LOC_Os01g54420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08150 |
| Downstream Genes | LOC_Os11g37100 LOC_Os06g47330 LOC_Os05g32390 LOC_Os02g47150 LOC_Os08g44420 LOC_Os08g44410 LOC_Os03g45760 LOC_Os07g32390 LOC_Os08g36490 LOC_Os08g40170 LOC_Os03g39020 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54420.1 |
| Rice Genome Annotation | LOC_Os01g54420.1 |
| Ricechip | LOC_Os01g54420.1 |
| KEGG | osa:4325546 dosa:Os01t0748000-00 |
| Entrez-Gene | 4325546 |