RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54870.1 View Network Show in Genome Browser |
| Other Names | Os01g0752300 |
| Description | 60S ribosomal protein L18a, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31559209-31560836 Nucleotide Length: 537 |
| Protein-coding | LOC_Os01g54870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g24690 LOC_Os01g10820 LOC_Os01g19840 LOC_Os01g25610 LOC_Os01g22490 LOC_Os01g49290 LOC_Os01g04730 LOC_Os01g51020 LOC_Os01g48770 LOC_Os01g52490 LOC_Os01g16890 More.. |
| Downstream Genes | LOC_Os03g37970 LOC_Os06g02510 LOC_Os05g40820 LOC_Os01g59990 LOC_Os03g22180 LOC_Os07g12250 LOC_Os07g47780 LOC_Os07g10660 LOC_Os03g10340 LOC_Os11g29190 LOC_Os05g38520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54870.1 |
| Rice Genome Annotation | LOC_Os01g54870.1 |
| Ricechip | LOC_Os01g54870.1 |
| KEGG | osa:4327004 dosa:Os01t0752300-01 |
| Entrez-Gene | 4327004 |