RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g54910.1 View Network Show in Genome Browser |
| Other Names | Os01g0752700 |
| Description | GTP-binding protein typA/bipA, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31575708-31583605 Nucleotide Length: 2022 |
| Protein-coding | LOC_Os01g54910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g14040 |
| Downstream Genes | LOC_Os12g41400 LOC_Os12g07740 LOC_Os05g51500 LOC_Os05g41060 LOC_Os02g22140 LOC_Os01g59790 LOC_Os07g12890 LOC_Os03g36780 LOC_Os05g04530 LOC_Os12g38310 LOC_Os09g29080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g54910.1 |
| Rice Genome Annotation | LOC_Os01g54910.1 |
| Ricechip | LOC_Os01g54910.1 |
| KEGG | osa:4327008 dosa:Os01t0752700-01 |
| Entrez-Gene | 4327008 |