RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55050.1 View Network Show in Genome Browser |
| Other Names | Os01g0754500 |
| Description | protein of unknown function DUF1421 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31651616-31656436 Nucleotide Length: 1788 |
| Protein-coding | LOC_Os01g55050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g22990 LOC_Os01g49010 LOC_Os01g33050 LOC_Os01g46980 LOC_Os01g49290 LOC_Os01g08020 |
| Downstream Genes | LOC_Os06g51250 LOC_Os06g07960 LOC_Os06g07860 LOC_Os02g19804 LOC_Os05g15890 LOC_Os01g57110 LOC_Os07g46750 LOC_Os07g42300 LOC_Os07g44940 LOC_Os09g17850 LOC_Os12g19549 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55050.1 |
| Rice Genome Annotation | LOC_Os01g55050.1 |
| Ricechip | LOC_Os01g55050.1 |
| KEGG | osa:4325133 dosa:Os01t0754500-01 |
| Entrez-Gene | 4325133 |