RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55260.1 View Network Show in Genome Browser |
| Other Names | Os01g0757400 |
| Description | AAA-type ATPase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31806962-31811865 Nucleotide Length: 1161 |
| Protein-coding | LOC_Os01g55260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os02g16670 LOC_Os03g53150 LOC_Os03g63930 LOC_Os12g40890 LOC_Os10g25780 LOC_Os01g56330 LOC_Os10g28640 LOC_Os03g56820 LOC_Os02g41470 LOC_Os03g02240 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395v osa-miR395t |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55260.1 |
| Rice Genome Annotation | LOC_Os01g55260.1 |
| Ricechip | LOC_Os01g55260.1 |
| KEGG | osa:4325146 dosa:Os01t0757400-01 |
| Entrez-Gene | 4325146 |