RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55290.1 View Network Show in Genome Browser |
| Other Names | Os01g0757700 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31825966-31830152 Nucleotide Length: 888 |
| Protein-coding | LOC_Os01g55290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43120 LOC_Os01g37820 |
| Downstream Genes | LOC_Os03g45400 LOC_Os02g33610 LOC_Os04g01830 LOC_Os04g52100 LOC_Os09g02214 LOC_Os10g12354 LOC_Os01g65400 LOC_Os02g58450 LOC_Os02g17360 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55290.1 |
| Rice Genome Annotation | LOC_Os01g55290.1 |
| Ricechip | LOC_Os01g55290.1 |
| KEGG | osa:4325304 dosa:Os01t0757700-01 |
| Entrez-Gene | 4325304 |