RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55360.4 View Network Show in Genome Browser |
| Other Names | Os01g0758400 |
| Description | phosphatidate cytidylyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 31873313-31877607 Nucleotide Length: 975 |
| Protein-coding | LOC_Os01g55360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54900 LOC_Os01g52400 LOC_Os01g47600 LOC_Os01g16960 LOC_Os01g45250 LOC_Os01g24950 LOC_Os01g45830 LOC_Os01g48300 |
| Downstream Genes | LOC_Os01g63830 LOC_Os03g38230 LOC_Os07g41680 LOC_Os06g07120 LOC_Os04g41300 LOC_Os07g38300 LOC_Os04g33300 LOC_Os01g73450 LOC_Os12g35630 LOC_Os02g24612 LOC_Os08g25290 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55360.4 |
| Rice Genome Annotation | LOC_Os01g55360.4 |
| Ricechip | LOC_Os01g55360.4 |
| KEGG | osa:4325310 dosa:Os01t0758400-01 |
| Entrez-Gene | 4325310 |