RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55580.1 View Network Show in Genome Browser |
| Other Names | Os01g0761100 |
| Description | tesmin/TSO1-like CXC domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32016622-32022401 Nucleotide Length: 1860 |
| Protein-coding | LOC_Os01g55580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os11g32900 LOC_Os08g42600 LOC_Os02g39300 LOC_Os05g01360 LOC_Os01g69130 LOC_Os08g01180 LOC_Os03g43890 LOC_Os07g32480 LOC_Os02g56130 LOC_Os03g04960 LOC_Os03g56800 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166g-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55580.1 |
| Rice Genome Annotation | LOC_Os01g55580.1 |
| Ricechip | LOC_Os01g55580.1 |
| KEGG | osa:4327019 dosa:Os01t0761100-01 |
| Entrez-Gene | 4327019 |