RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55590.1 View Network Show in Genome Browser |
| Other Names | Os01g0761300 |
| Description | AMP-binding enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32026305-32032687 Nucleotide Length: 1677 |
| Protein-coding | LOC_Os01g55590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g32670 LOC_Os03g59080 LOC_Os07g03200 LOC_Os09g23070 LOC_Os02g41710 LOC_Os04g35570 LOC_Os02g34860 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2275a osa-miR2275b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55590.1 |
| Rice Genome Annotation | LOC_Os01g55590.1 |
| Ricechip | LOC_Os01g55590.1 |
| KEGG | osa:4327020 dosa:Os01t0761300-01 |
| Entrez-Gene | 4327020 |