RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55700.1 View Network Show in Genome Browser |
| Other Names | Os01g0762400 |
| Description | NLI interacting factor-like phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32076732-32078743 Nucleotide Length: 1086 |
| Protein-coding | LOC_Os01g55700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55670 LOC_Os01g16910 |
| Downstream Genes | LOC_Os05g32430 LOC_Os05g03910 LOC_Os07g22700 LOC_Os01g65450 LOC_Os03g02390 LOC_Os11g31890 LOC_Os02g42600 LOC_Os01g63820 LOC_Os07g41330 LOC_Os03g30200 LOC_Os10g37530 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55700.1 |
| Rice Genome Annotation | LOC_Os01g55700.1 |
| Ricechip | LOC_Os01g55700.1 |
| KEGG | osa:9269938 dosa:Os01t0762400-00 |
| Entrez-Gene | 9269938 |