RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55820.1 View Network Show in Genome Browser |
| Other Names | Os01g0763900 |
| Description | X8 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32145824-32147365 Nucleotide Length: 624 |
| Protein-coding | LOC_Os01g55820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49290 LOC_Os01g04730 LOC_Os01g37837 LOC_Os01g19840 LOC_Os01g55040 LOC_Os01g03144 LOC_Os01g40470 LOC_Os01g25610 LOC_Os01g43090 LOC_Os01g11070 LOC_Os01g11300 More.. |
| Downstream Genes | LOC_Os07g30150 LOC_Os03g61100 LOC_Os12g39860 LOC_Os04g42520 LOC_Os02g40010 LOC_Os08g23730 LOC_Os04g51630 LOC_Os12g40130 LOC_Os08g13690 LOC_Os11g34350 LOC_Os02g41550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55820.1 |
| Rice Genome Annotation | LOC_Os01g55820.1 |
| Ricechip | LOC_Os01g55820.1 |
| KEGG | osa:4326886 dosa:Os01t0763900-01 |
| Entrez-Gene | 4326886 |