RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55830.1 View Network Show in Genome Browser |
| Other Names | Os01g0764000 |
| Description | glutathione S-transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32148052-32152116 Nucleotide Length: 648 |
| Protein-coding | LOC_Os01g55830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40610 LOC_Os01g49710 LOC_Os01g49720 LOC_Os01g37750 LOC_Os01g42234 LOC_Os01g28450 LOC_Os01g37910 LOC_Os01g40600 LOC_Os01g49690 LOC_Os01g37760 LOC_Os01g43844 More.. |
| Downstream Genes | LOC_Os03g04240 LOC_Os06g37440 LOC_Os03g04250 LOC_Os04g20220 LOC_Os02g12794 LOC_Os02g12800 LOC_Os05g39240 LOC_Os12g04290 LOC_Os11g04520 LOC_Os11g37730 LOC_Os11g14040 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 |
| Metacyc Pathways | PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55830.1 |
| Rice Genome Annotation | LOC_Os01g55830.1 |
| Ricechip | LOC_Os01g55830.1 |
| KEGG | osa:4326887 dosa:Os01t0764000-01 |
| Entrez-Gene | 4326887 |