RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55900.1 View Network Show in Genome Browser |
| Other Names | Os01g0764700 |
| Description | holliday junction resolvase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32189931-32193462 Nucleotide Length: 537 |
| Protein-coding | LOC_Os01g55900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03030 LOC_Os01g06020 |
| Downstream Genes | LOC_Os10g40650 LOC_Os05g41510 LOC_Os06g13660 LOC_Os03g44820 LOC_Os10g10244 LOC_Os07g15440 LOC_Os11g02450 LOC_Os05g06940 LOC_Os12g02380 LOC_Os08g15030 LOC_Os05g06920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55900.1 |
| Rice Genome Annotation | LOC_Os01g55900.1 |
| Ricechip | LOC_Os01g55900.1 |
| KEGG | osa:4326892 dosa:Os01t0764700-01 |
| Entrez-Gene | 4326892 |