RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g55940.1 View Network Show in Genome Browser |
| Other Names | Os01g0764800 |
| Description | OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32221376-32225123 Nucleotide Length: 1845 |
| Protein-coding | LOC_Os01g55940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os05g32810 LOC_Os01g72740 LOC_Os05g04490 LOC_Os03g14590 LOC_Os04g39540 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Reference | |
|---|---|
| PubMed | 23112280 16598073 21071600 21447996 15856348 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g55940.1 |
| Rice Genome Annotation | LOC_Os01g55940.1 |
| Ricechip | LOC_Os01g55940.1 |
| KEGG | osa:4326893 dosa:Os01t0764800-01 |
| Entrez-Gene | 4326893 |