RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56130.1 View Network Show in Genome Browser |
| Other Names | Os01g0766900 |
| Description | CSLC1 - cellulose synthase-like family C, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32318613-32322673 Nucleotide Length: 2073 |
| Protein-coding | LOC_Os01g56130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g60939 LOC_Os03g60700 LOC_Os04g43360 LOC_Os04g38910 LOC_Os03g63270 LOC_Os07g36590 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56130.1 |
| Rice Genome Annotation | LOC_Os01g56130.1 |
| Ricechip | LOC_Os01g56130.1 |
| KEGG | osa:4325496 dosa:Os01t0766900-01 |
| Entrez-Gene | 4325496 |