RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56200.2 View Network Show in Genome Browser |
| Other Names | Os01g0767900 |
| Description | BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32367683-32371816 Nucleotide Length: 819 |
| Protein-coding | LOC_Os01g56200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g17260 |
| Downstream Genes | LOC_Os06g21330 LOC_Os12g02030 LOC_Os08g38700 LOC_Os07g15490 LOC_Os06g31100 LOC_Os11g02070 LOC_Os05g33050 LOC_Os07g46160 LOC_Os07g01140 LOC_Os12g02530 LOC_Os11g02610 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56200.2 |
| Rice Genome Annotation | LOC_Os01g56200.2 |
| Ricechip | LOC_Os01g56200.2 |
| KEGG | osa:4325503 dosa:Os01t0767900-01 |
| Entrez-Gene | 4325503 |