RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56310.1 View Network Show in Genome Browser |
| Other Names | Os01g0769100 |
| Description | radical SAM enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32440171-32443318 Nucleotide Length: 1098 |
| Protein-coding | LOC_Os01g56310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g45370 LOC_Os01g49290 LOC_Os01g23610 |
| Downstream Genes | LOC_Os12g40450 LOC_Os03g20560 LOC_Os04g40840 LOC_Os04g35480 LOC_Os12g17070 LOC_Os11g38030 LOC_Os08g42730 LOC_Os01g56560 LOC_Os03g56390 LOC_Os02g15870 LOC_Os12g32230 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00785 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56310.1 |
| Rice Genome Annotation | LOC_Os01g56310.1 |
| Ricechip | LOC_Os01g56310.1 |
| KEGG | osa:4325595 |
| Entrez-Gene | 4325595 |