RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56350.2 View Network Show in Genome Browser |
| Other Names | Os01g0769900 |
| Description | PTAC12, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32470274-32476639 Nucleotide Length: 1656 |
| Protein-coding | LOC_Os01g56350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53700 |
| Downstream Genes | LOC_Os03g19510 LOC_Os02g02860 LOC_Os02g54360 LOC_Os12g17910 LOC_Os05g44330 LOC_Os11g23790 LOC_Os11g41910 LOC_Os03g25960 LOC_Os07g46600 LOC_Os09g21460 LOC_Os02g24020 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56350.2 |
| Rice Genome Annotation | LOC_Os01g56350.2 |
| Ricechip | LOC_Os01g56350.2 |
| KEGG | osa:4325601 dosa:Os01t0769900-01 |
| Entrez-Gene | 4325601 |